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PyDISH No: 19226

PDB: 9g9z,
chainID: d, resSeq: 502
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 4.03 Å
origomeric count: 31

axial ligand #1: HIS

chainID: d,
resSeq: 111,
Coordination distance[Å]: 2.269
molecule: Cytochrome b
Organism: Paracoccus denitrificans PD1222

axial ligand #2: HIS

chainID: d,
resSeq: 212,
Coordination distance[Å]: 2.227
molecule: same as ligand #1

List of other hemes in pdb:9g9z

ID of heme	Distortion	Axial ligands on heme		Function & structure
9g9z-a-505	`sad. -0.01 ruf. +0.23 dom. +0.02 bre. +0.13`	HIS	chainID: a, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 31 pocket vol.: 445.0 Å³ d(Fe-oop): 0.080 Å
9g9z-a-505	`sad. -0.01 ruf. +0.23 dom. +0.02 bre. +0.13`	HIS	chainID: a, resSeq: 198, molecule: Cytochrome b
9g9z-a-507	`sad. -0.56 ruf. +0.18 dom. +0.18 bre. +0.16`	HIS	chainID: a, resSeq: 111, molecule: Cytochrome b	electron transporter oligomeric count: 31 pocket vol.: 454.0 Å³ d(Fe-oop): 0.063 Å
9g9z-a-507	`sad. -0.56 ruf. +0.18 dom. +0.18 bre. +0.16`	HIS	chainID: a, resSeq: 212, molecule: Cytochrome b
9g9z-b-502	`sad. +0.02 ruf. +0.28 dom. -0.01 bre. +0.05`	HIS	chainID: b, resSeq: 249, molecule: Cytochrome c1	electron transporter oligomeric count: 31 pocket vol.: 430.0 Å³ d(Fe-oop): 0.058 Å
9g9z-b-502	`sad. +0.02 ruf. +0.28 dom. -0.01 bre. +0.05`	MET	chainID: b, resSeq: 373, molecule: Cytochrome c1
9g9z-d-503	`sad. -0.02 ruf. +0.12 dom. -0.04 bre. +0.06`	HIS	chainID: d, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 31 pocket vol.: 454.0 Å³ d(Fe-oop): 0.068 Å
9g9z-d-503	`sad. -0.02 ruf. +0.12 dom. -0.04 bre. +0.06`	HIS	chainID: d, resSeq: 198, molecule: Cytochrome b
9g9z-e-502	`sad. -0.15 ruf. -0.27 dom. +0.18 bre. +0.00`	HIS	chainID: e, resSeq: 249, molecule: Cytochrome c1	electron transporter oligomeric count: 31 pocket vol.: 417.0 Å³ d(Fe-oop): 0.096 Å
9g9z-e-502	`sad. -0.15 ruf. -0.27 dom. +0.18 bre. +0.00`	MET	chainID: e, resSeq: 373, molecule: Cytochrome c1
9g9z-g-601	`sad. -0.02 ruf. +0.01 dom. +0.01 bre. +0.07`	HIS	chainID: g, resSeq: 94, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 31 pocket vol.: 666.0 Å³ d(Fe-oop): 0.012 Å
9g9z-g-601	`sad. -0.02 ruf. +0.01 dom. +0.01 bre. +0.07`	HIS	chainID: g, resSeq: 413, molecule: Cytochrome c oxidase subunit 1
9g9z-g-604	`sad. +0.01 ruf. +0.01 dom. +0.02 bre. +0.07`	HIS	chainID: g, resSeq: 411, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 31 pocket vol.: 734.0 Å³ d(Fe-oop): 0.033 Å
9g9z-g-604	`sad. +0.01 ruf. +0.01 dom. +0.02 bre. +0.07`	Not assigned.