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PyDISH No: 18487

PDB: 8zo8,
chainID: QC, resSeq: 403
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.24 Å
origomeric count: 79

axial ligand #1: HIS

chainID: QC,
resSeq: 97,
Coordination distance[Å]: 2.154
molecule: Cytochrome b
Organism: Sus scrofa

axial ligand #2: HIS

chainID: QC,
resSeq: 196,
Coordination distance[Å]: 2.078
molecule: same as ligand #1

List of other hemes in pdb:8zo8

ID of heme Distortion Axial ligands on heme Function & structure
8zo8-C1-602
sad. +0.01
ruf. +0.16
dom. +0.02
bre. -0.39
HIS chainID: C1,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 645.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: C1, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8zo8-C1-603
sad. +0.02
ruf. +0.07
dom. +0.02
bre. -0.39
HIS chainID: C1,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 649.0 Å3
d(Fe-oop): 0.003 Å
Not assigned.
8zo8-QC-402
sad. +0.01
ruf. -0.32
dom. -0.07
bre. +0.04
HIS chainID: QC,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 419.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: QC, resSeq: 182,
molecule: Cytochrome b
8zo8-QD-401
sad. -0.00
ruf. -0.20
dom. -0.22
bre. -0.03
HIS chainID: QD,
resSeq: 126,
molecule: Cytochrome c domain-containing protein
electron transporter
oligomeric count: 79
pocket vol.: 416.0 Å3
d(Fe-oop): 0.084 Å
MET chainID: QD, resSeq: 245,
molecule: Cytochrome c domain-containing protein
8zo8-Qc-402
sad. +0.00
ruf. -0.26
dom. -0.05
bre. +0.04
HIS chainID: Qc,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 415.0 Å3
d(Fe-oop): 0.016 Å
HIS chainID: Qc, resSeq: 182,
molecule: Cytochrome b
8zo8-Qc-403
sad. -0.09
ruf. -0.48
dom. +0.15
bre. +0.05
HIS chainID: Qc,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 416.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: Qc, resSeq: 196,
molecule: Cytochrome b
8zo8-Qd-402
sad. -0.02
ruf. -0.35
dom. -0.04
bre. -0.04
HIS chainID: Qd,
resSeq: 126,
molecule: Cytochrome c domain-containing protein
electron transporter
oligomeric count: 79
pocket vol.: 452.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: Qd, resSeq: 245,
molecule: Cytochrome c domain-containing protein