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PyDISH No: 18489

PDB: 9cuf,
chainID: A, resSeq: 504
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.3 Å

axial ligand #1: HIS

chainID: A,
resSeq: 279,
Coordination distance[Å]: 2.218
molecule: Cytochrome c-552
EC number: 1.7.2.2
Organism: Shewanella oneidensis

axial ligand #2: HIS

chainID: A,
resSeq: 386,
Coordination distance[Å]: 2.471
molecule: same as ligand #1

List of other hemes in pdb:9cuf

ID of heme	Distortion	Axial ligands on heme		Function & structure
9cuf-A-501	`sad. +0.96 ruf. -1.64 dom. +0.11 bre. +0.08`	LYS	chainID: A, resSeq: 123, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 412.0 Å³ d(Fe-oop): 0.517 Å
9cuf-A-501	`sad. +0.96 ruf. -1.64 dom. +0.11 bre. +0.08`	Not assigned.
9cuf-A-502	`sad. +0.73 ruf. +0.11 dom. +0.04 bre. -0.27`	HIS	chainID: A, resSeq: 161, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 451.0 Å³ d(Fe-oop): 0.015 Å
9cuf-A-502	`sad. +0.73 ruf. +0.11 dom. +0.04 bre. -0.27`	HIS	chainID: A, resSeq: 294, molecule: Cytochrome c-552
9cuf-A-503	`sad. -0.26 ruf. -1.19 dom. -0.19 bre. -0.16`	HIS	chainID: A, resSeq: 91, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 438.0 Å³ d(Fe-oop): 0.006 Å
9cuf-A-503	`sad. -0.26 ruf. -1.19 dom. -0.19 bre. -0.16`	HIS	chainID: A, resSeq: 203, molecule: Cytochrome c-552
9cuf-A-505	`sad. -0.01 ruf. -0.80 dom. +0.09 bre. -0.11`	HIS	chainID: A, resSeq: 268, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 489.0 Å³ d(Fe-oop): 0.154 Å
9cuf-A-505	`sad. -0.01 ruf. -0.80 dom. +0.09 bre. -0.11`	HIS	chainID: A, resSeq: 311, molecule: Cytochrome c-552
9cuf-B-501	`sad. +0.79 ruf. -0.27 dom. +0.33 bre. -0.18`	LYS	chainID: B, resSeq: 123, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 423.0 Å³ d(Fe-oop): 0.092 Å
9cuf-B-501	`sad. +0.79 ruf. -0.27 dom. +0.33 bre. -0.18`	Not assigned.
9cuf-B-502	`sad. +0.33 ruf. -1.80 dom. -0.82 bre. +0.20`	HIS	chainID: B, resSeq: 161, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 461.0 Å³ d(Fe-oop): 0.191 Å
9cuf-B-502	`sad. +0.33 ruf. -1.80 dom. -0.82 bre. +0.20`	HIS	chainID: B, resSeq: 294, molecule: Cytochrome c-552
9cuf-B-503	`sad. -0.38 ruf. -0.74 dom. +0.21 bre. -0.21`	HIS	chainID: B, resSeq: 91, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 439.0 Å³ d(Fe-oop): 0.191 Å
9cuf-B-503	`sad. -0.38 ruf. -0.74 dom. +0.21 bre. -0.21`	HIS	chainID: B, resSeq: 203, molecule: Cytochrome c-552
9cuf-B-504	`sad. -0.52 ruf. -1.14 dom. +0.05 bre. -0.07`	HIS	chainID: B, resSeq: 279, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 503.0 Å³ d(Fe-oop): 0.131 Å
9cuf-B-504	`sad. -0.52 ruf. -1.14 dom. +0.05 bre. -0.07`	HIS	chainID: B, resSeq: 386, molecule: Cytochrome c-552
9cuf-B-505	`sad. -0.28 ruf. -0.61 dom. +0.01 bre. +0.04`	HIS	chainID: B, resSeq: 268, molecule: Cytochrome c-552	oxidoreductase oligomeric count: 2 pocket vol.: 497.0 Å³ d(Fe-oop): 0.096 Å
9cuf-B-505	`sad. -0.28 ruf. -0.61 dom. +0.01 bre. +0.04`	HIS	chainID: B, resSeq: 311, molecule: Cytochrome c-552