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PyDISH No: 17901

PDB: 8s5i,
chainID: C, resSeq: 601
heme type: B

distortion

Protein data

function: lyase
experiment: ELECTRON MICROSCOPY
resolution: 3.1 Å

axial ligand #1: HIS

chainID: C,
resSeq: 65,
Coordination distance[Å]: 2.833
molecule: Cystathionine beta-synthase
EC number: 4.2.1.22
Organism: Homo sapiens

List of other hemes in pdb:8s5i

ID of heme Distortion Axial ligands on heme Function & structure
8s5i-A-601
sad. -0.69
ruf. -0.94
dom. -0.01
bre. -0.02
HIS chainID: A,
resSeq: 65,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 6
pocket vol.: 525.0 Å3
d(Fe-oop): 0.042 Å
Not assigned.
8s5i-B-601
sad. -0.69
ruf. -0.94
dom. -0.01
bre. -0.02
HIS chainID: B,
resSeq: 65,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 6
pocket vol.: 513.0 Å3
d(Fe-oop): 0.042 Å
Not assigned.
8s5i-D-601
sad. -0.99
ruf. -1.15
dom. -0.36
bre. +0.02
HIS chainID: D,
resSeq: 65,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 6
pocket vol.: 475.0 Å3
d(Fe-oop): 0.059 Å
Not assigned.
8s5i-E-601
sad. -1.00
ruf. -1.16
dom. -0.34
bre. +0.03
HIS chainID: E,
resSeq: 65,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 6
pocket vol.: 488.0 Å3
d(Fe-oop): 0.080 Å
Not assigned.
8s5i-F-601
sad. -0.93
ruf. -0.92
dom. -0.24
bre. -0.04
HIS chainID: F,
resSeq: 65,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 6
pocket vol.: 470.0 Å3
d(Fe-oop): 0.113 Å
Not assigned.