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PyDISH No: 17891

PDB: 8ugg,
chainID: 3P, resSeq: 501
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.6 Å

axial ligand #1: HIS

chainID: 3P,
resSeq: 83,
Coordination distance[Å]: 2.542
molecule: Cytochrome b
Organism: Sus scrofa

axial ligand #2: HIS

chainID: 3P,
resSeq: 182,
Coordination distance[Å]: 1.966
molecule: same as ligand #1

List of other hemes in pdb:8ugg

ID of heme Distortion Axial ligands on heme Function & structure
8ugg-3C-501
sad. +0.01
ruf. -0.57
dom. +0.09
bre. +0.05
HIS chainID: 3C,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 494.0 Å3
d(Fe-oop): 0.035 Å
HIS chainID: 3C, resSeq: 182,
molecule: Cytochrome b
8ugg-3C-502
sad. -0.56
ruf. -0.81
dom. +0.53
bre. +0.13
HIS chainID: 3C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 403.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: 3C, resSeq: 196,
molecule: Cytochrome b
8ugg-3D-501
sad. -0.01
ruf. -0.87
dom. -0.06
bre. -0.61
HIS chainID: 3D,
resSeq: 129,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 22
pocket vol.: 482.0 Å3
d(Fe-oop): 0.022 Å
MET chainID: 3D, resSeq: 249,
molecule: Cytochrome c1, heme protein, mitochondrial
8ugg-3P-502
sad. -0.56
ruf. -0.83
dom. +0.52
bre. +0.13
HIS chainID: 3P,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 409.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: 3P, resSeq: 196,
molecule: Cytochrome b
8ugg-3Q-501
sad. +0.00
ruf. -0.45
dom. +0.07
bre. -0.64
HIS chainID: 3Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 22
pocket vol.: 458.0 Å3
d(Fe-oop): 0.023 Å
Not assigned.