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PyDISH No: 18120

PDB: 8ugh,
chainID: 4A, resSeq: 601
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.1 Å

axial ligand #1: HIS

chainID: 4A,
resSeq: 61,
Coordination distance[Å]: 2.716
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Sus scrofa

axial ligand #2: HIS

chainID: 4A,
resSeq: 378,
Coordination distance[Å]: 2.05
molecule: same as ligand #1

List of other hemes in pdb:8ugh

ID of heme	Distortion	Axial ligands on heme		Function & structure
8ugh-3C-501	`sad. -0.08 ruf. -0.27 dom. +0.04 bre. -0.00`	HIS	chainID: 3C, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 398.0 Å³ d(Fe-oop): 0.052 Å
8ugh-3C-501	`sad. -0.08 ruf. -0.27 dom. +0.04 bre. -0.00`	HIS	chainID: 3C, resSeq: 182, molecule: Cytochrome b
8ugh-3C-502	`sad. -0.53 ruf. -0.53 dom. +0.38 bre. +0.06`	HIS	chainID: 3C, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 360.0 Å³ d(Fe-oop): 0.014 Å
8ugh-3C-502	`sad. -0.53 ruf. -0.53 dom. +0.38 bre. +0.06`	HIS	chainID: 3C, resSeq: 196, molecule: Cytochrome b
8ugh-3D-501	`sad. -0.01 ruf. -0.32 dom. +0.18 bre. -0.63`	HIS	chainID: 3D, resSeq: 129, molecule: Cytochrome c1	electron transporter oligomeric count: 81 pocket vol.: 437.0 Å³ d(Fe-oop): 0.059 Å
8ugh-3D-501	`sad. -0.01 ruf. -0.32 dom. +0.18 bre. -0.63`	MET	chainID: 3D, resSeq: 249, molecule: Cytochrome c1
8ugh-3P-501	`sad. -0.10 ruf. -0.18 dom. -0.03 bre. -0.00`	HIS	chainID: 3P, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 419.0 Å³ d(Fe-oop): 0.084 Å
8ugh-3P-501	`sad. -0.10 ruf. -0.18 dom. -0.03 bre. -0.00`	HIS	chainID: 3P, resSeq: 182, molecule: Cytochrome b
8ugh-3P-502	`sad. -0.49 ruf. -0.60 dom. +0.34 bre. +0.07`	HIS	chainID: 3P, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 355.0 Å³ d(Fe-oop): 0.021 Å
8ugh-3P-502	`sad. -0.49 ruf. -0.60 dom. +0.34 bre. +0.07`	HIS	chainID: 3P, resSeq: 196, molecule: Cytochrome b
8ugh-3Q-501	`sad. -0.00 ruf. -0.69 dom. +0.01 bre. -0.61`	HIS	chainID: 3Q, resSeq: 41, molecule: Cytochrome c1	electron transporter oligomeric count: 81 pocket vol.: 425.0 Å³ d(Fe-oop): 0.001 Å
8ugh-3Q-501	`sad. -0.00 ruf. -0.69 dom. +0.01 bre. -0.61`	MET	chainID: 3Q, resSeq: 160, molecule: Cytochrome c1
8ugh-4A-602	`sad. -0.47 ruf. +0.37 dom. +0.64 bre. -0.47`	HIS	chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 81 pocket vol.: 690.0 Å³ d(Fe-oop): 0.005 Å
8ugh-4A-602	`sad. -0.47 ruf. +0.37 dom. +0.64 bre. -0.47`	Not assigned.