Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 18116

PDB: 8ugh,
chainID: 3D, resSeq: 501
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.1 Å

axial ligand #1: HIS

chainID: 3D,
resSeq: 129,
Coordination distance[Å]: 2.28
molecule: Cytochrome c1
Organism: Sus scrofa

axial ligand #2: MET

chainID: 3D,
resSeq: 249,
Coordination distance[Å]: 2.532
molecule: same as ligand #1

List of other hemes in pdb:8ugh

ID of heme	Distortion	Axial ligands on heme		Function & structure
8ugh-3C-501	`sad. -0.08 ruf. -0.27 dom. +0.04 bre. -0.00`	HIS	chainID: 3C, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 398.0 Å³ d(Fe-oop): 0.052 Å
8ugh-3C-501	`sad. -0.08 ruf. -0.27 dom. +0.04 bre. -0.00`	HIS	chainID: 3C, resSeq: 182, molecule: Cytochrome b
8ugh-3C-502	`sad. -0.53 ruf. -0.53 dom. +0.38 bre. +0.06`	HIS	chainID: 3C, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 360.0 Å³ d(Fe-oop): 0.014 Å
8ugh-3C-502	`sad. -0.53 ruf. -0.53 dom. +0.38 bre. +0.06`	HIS	chainID: 3C, resSeq: 196, molecule: Cytochrome b
8ugh-3P-501	`sad. -0.10 ruf. -0.18 dom. -0.03 bre. -0.00`	HIS	chainID: 3P, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 419.0 Å³ d(Fe-oop): 0.084 Å
8ugh-3P-501	`sad. -0.10 ruf. -0.18 dom. -0.03 bre. -0.00`	HIS	chainID: 3P, resSeq: 182, molecule: Cytochrome b
8ugh-3P-502	`sad. -0.49 ruf. -0.60 dom. +0.34 bre. +0.07`	HIS	chainID: 3P, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 355.0 Å³ d(Fe-oop): 0.021 Å
8ugh-3P-502	`sad. -0.49 ruf. -0.60 dom. +0.34 bre. +0.07`	HIS	chainID: 3P, resSeq: 196, molecule: Cytochrome b
8ugh-3Q-501	`sad. -0.00 ruf. -0.69 dom. +0.01 bre. -0.61`	HIS	chainID: 3Q, resSeq: 41, molecule: Cytochrome c1	electron transporter oligomeric count: 81 pocket vol.: 425.0 Å³ d(Fe-oop): 0.001 Å
8ugh-3Q-501	`sad. -0.00 ruf. -0.69 dom. +0.01 bre. -0.61`	MET	chainID: 3Q, resSeq: 160, molecule: Cytochrome c1
8ugh-4A-601	`sad. -0.66 ruf. +0.48 dom. +0.56 bre. -0.43`	HIS	chainID: 4A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 81 pocket vol.: 620.0 Å³ d(Fe-oop): 0.053 Å
8ugh-4A-601	`sad. -0.66 ruf. +0.48 dom. +0.56 bre. -0.43`	HIS	chainID: 4A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
8ugh-4A-602	`sad. -0.47 ruf. +0.37 dom. +0.64 bre. -0.47`	HIS	chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 81 pocket vol.: 690.0 Å³ d(Fe-oop): 0.005 Å
8ugh-4A-602	`sad. -0.47 ruf. +0.37 dom. +0.64 bre. -0.47`	Not assigned.