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Protein data
function: oxidoreductaseexperiment: ELECTRON MICROSCOPY
resolution: 2.5 Å
axial ligand #1: HIS
chainID: C,resSeq: 96,
Coordination distance[Å]: 2.27
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: C,resSeq: 197,
Coordination distance[Å]: 2.161
molecule: same as ligand #1
List of other hemes in pdb:8abk
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abk-C-501 |
sad. +0.08 ruf. -0.30 dom. -0.05 bre. +0.02 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 388.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8abk-D-401 |
sad. -0.07 ruf. -0.42 dom. -0.02 bre. -0.31 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 399.0 Å3 d(Fe-oop): 0.011 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abk-N-501 |
sad. +0.10 ruf. -0.33 dom. -0.01 bre. +0.02 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 400.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8abk-N-502 |
sad. -0.53 ruf. -0.35 dom. +0.06 bre. +0.14 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 384.0 Å3 d(Fe-oop): 0.064 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8abk-O-401 |
sad. -0.08 ruf. -0.38 dom. +0.05 bre. -0.34 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 403.0 Å3 d(Fe-oop): 0.020 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
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