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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 3.0 Å
axial ligand #1: HIS
chainID: O,resSeq: 128,
Coordination distance[Å]: 1.952
molecule: YALI0A17468p
Organism: Yarrowia lipolytica
axial ligand #2: MET
chainID: O,resSeq: 248,
Coordination distance[Å]: 2.308
molecule: same as ligand #1
List of other hemes in pdb:8abi
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abi-C-501 |
sad. -0.01 ruf. -0.23 dom. -0.07 bre. +0.18 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 389.0 Å3 d(Fe-oop): 0.031 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8abi-C-502 |
sad. -0.59 ruf. -0.35 dom. +0.02 bre. +0.18 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 381.0 Å3 d(Fe-oop): 0.137 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8abi-D-401 |
sad. -0.05 ruf. -0.56 dom. +0.03 bre. -0.22 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 403.0 Å3 d(Fe-oop): 0.006 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abi-N-501 |
sad. +0.08 ruf. -0.22 dom. -0.07 bre. +0.16 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 400.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8abi-N-502 |
sad. -0.62 ruf. -0.34 dom. +0.04 bre. +0.25 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 370.0 Å3 d(Fe-oop): 0.096 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||