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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 3.7 Å
axial ligand #1: HIS
chainID: C,resSeq: 82,
Coordination distance[Å]: 2.048
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: C,resSeq: 183,
Coordination distance[Å]: 2.047
molecule: same as ligand #1
List of other hemes in pdb:8abj
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abj-C-502 |
sad. -0.59 ruf. -0.32 dom. -0.03 bre. +0.18 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 388.0 Å3 d(Fe-oop): 0.145 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
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8abj-D-401 |
sad. -0.03 ruf. -0.50 dom. +0.10 bre. -0.18 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 415.0 Å3 d(Fe-oop): 0.026 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abj-N-501 |
sad. +0.03 ruf. -0.20 dom. -0.09 bre. +0.16 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 395.0 Å3 d(Fe-oop): 0.025 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8abj-N-502 |
sad. -0.59 ruf. -0.33 dom. +0.01 bre. +0.27 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 376.0 Å3 d(Fe-oop): 0.108 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8abj-O-401 |
sad. -0.02 ruf. -0.57 dom. +0.10 bre. -0.19 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 416.0 Å3 d(Fe-oop): 0.037 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
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