Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 12870

PDB: 6hu9,
chainID: D, resSeq: 401
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 3.35 Å

axial ligand #1: HIS

chainID: D,
resSeq: 105,
Coordination distance[Å]: 1.99
molecule: Cytochrome c1, heme protein, mitochondrial
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 225,
Coordination distance[Å]: 1.99
molecule: same as ligand #1

List of other hemes in pdb:6hu9

ID of heme	Distortion	Axial ligands on heme		Function & structure
6hu9-C-601	`sad. +0.21 ruf. -0.32 dom. -0.13 bre. +0.13`	HIS	chainID: C, resSeq: 82, molecule: Cytochrome b	translocase oligomeric count: 44 pocket vol.: 416.0 Å³ d(Fe-oop): 0.018 Å
6hu9-C-601	`sad. +0.21 ruf. -0.32 dom. -0.13 bre. +0.13`	HIS	chainID: C, resSeq: 183, molecule: Cytochrome b
6hu9-C-602	`sad. -0.52 ruf. -0.49 dom. +0.38 bre. +0.14`	HIS	chainID: C, resSeq: 96, molecule: Cytochrome b	translocase oligomeric count: 44 pocket vol.: 388.0 Å³ d(Fe-oop): 0.059 Å
6hu9-C-602	`sad. -0.52 ruf. -0.49 dom. +0.38 bre. +0.14`	HIS	chainID: C, resSeq: 197, molecule: Cytochrome b
6hu9-N-601	`sad. +0.07 ruf. -0.26 dom. -0.05 bre. +0.10`	HIS	chainID: N, resSeq: 82, molecule: Cytochrome b	translocase oligomeric count: 44 pocket vol.: 395.0 Å³ d(Fe-oop): 0.017 Å
6hu9-N-601	`sad. +0.07 ruf. -0.26 dom. -0.05 bre. +0.10`	HIS	chainID: N, resSeq: 183, molecule: Cytochrome b
6hu9-N-602	`sad. -0.53 ruf. -0.39 dom. +0.35 bre. +0.13`	HIS	chainID: N, resSeq: 96, molecule: Cytochrome b	translocase oligomeric count: 44 pocket vol.: 379.0 Å³ d(Fe-oop): 0.051 Å
6hu9-N-602	`sad. -0.53 ruf. -0.39 dom. +0.35 bre. +0.13`	HIS	chainID: N, resSeq: 197, molecule: Cytochrome b
6hu9-O-401	`sad. -0.01 ruf. -0.59 dom. -0.20 bre. -0.56`	HIS	chainID: O, resSeq: 105, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 44 pocket vol.: 419.0 Å³ d(Fe-oop): 0.070 Å
6hu9-O-401	`sad. -0.01 ruf. -0.59 dom. -0.20 bre. -0.56`	MET	chainID: O, resSeq: 225, molecule: Cytochrome c1, heme protein, mitochondrial
6hu9-a-602	`sad. -0.60 ruf. -0.68 dom. +0.52 bre. -0.32`	HIS	chainID: a, resSeq: 62, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 44 pocket vol.: 631.0 Å³ d(Fe-oop): 0.059 Å
6hu9-a-602	`sad. -0.60 ruf. -0.68 dom. +0.52 bre. -0.32`	HIS	chainID: a, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
6hu9-a-603	`sad. -0.36 ruf. +0.12 dom. +0.56 bre. -0.40`	HIS	chainID: a, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 44 pocket vol.: 720.0 Å³ d(Fe-oop): 0.002 Å
6hu9-a-603	`sad. -0.36 ruf. +0.12 dom. +0.56 bre. -0.40`	Not assigned.
6hu9-m-602	`sad. -0.76 ruf. -0.27 dom. +0.67 bre. -0.32`	HIS	chainID: m, resSeq: 62, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 44 pocket vol.: 633.0 Å³ d(Fe-oop): 0.023 Å
6hu9-m-602	`sad. -0.76 ruf. -0.27 dom. +0.67 bre. -0.32`	HIS	chainID: m, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
6hu9-m-603	`sad. -0.42 ruf. +0.24 dom. +0.58 bre. -0.40`	HIS	chainID: m, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 44 pocket vol.: 677.0 Å³ d(Fe-oop): 0.007 Å
6hu9-m-603	`sad. -0.42 ruf. +0.24 dom. +0.58 bre. -0.40`	Not assigned.