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PyDISH No: 09856

PDB: 4toe,
chainID: V, resSeq: 206
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: MET

chainID: U,
resSeq: 52,
Coordination distance[Å]: 2.34
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Pseudomonas aeruginosa

axial ligand #2: MET

chainID: V,
resSeq: 52,
Coordination distance[Å]: 2.388
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Pseudomonas aeruginosa

List of other hemes in pdb:4toe

ID of heme Distortion Axial ligands on heme Function & structure
4toe-A-207
sad. -0.26
ruf. +0.00
dom. -0.04
bre. -0.21
MET chainID: A,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 502.0 Å3
d(Fe-oop): 0.048 Å
MET chainID: B, resSeq: 52,
molecule: Bacterioferritin
4toe-D-207
sad. -0.23
ruf. +0.08
dom. +0.01
bre. -0.14
MET chainID: C,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 500.0 Å3
d(Fe-oop): 0.040 Å
MET chainID: D, resSeq: 52,
molecule: Bacterioferritin
4toe-E-207
sad. -0.28
ruf. -0.12
dom. +0.02
bre. -0.22
MET chainID: E,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 499.0 Å3
d(Fe-oop): 0.029 Å
MET chainID: F, resSeq: 52,
molecule: Bacterioferritin
4toe-G-208
sad. -0.25
ruf. +0.07
dom. -0.00
bre. -0.19
MET chainID: G,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 525.0 Å3
d(Fe-oop): 0.006 Å
MET chainID: H, resSeq: 52,
molecule: Bacterioferritin
4toe-I-207
sad. -0.24
ruf. -0.06
dom. -0.00
bre. -0.18
MET chainID: I,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 524.0 Å3
d(Fe-oop): 0.027 Å
MET chainID: J, resSeq: 52,
molecule: Bacterioferritin
4toe-L-207
sad. -0.28
ruf. +0.06
dom. -0.03
bre. -0.18
MET chainID: K,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 509.0 Å3
d(Fe-oop): 0.023 Å
MET chainID: L, resSeq: 52,
molecule: Bacterioferritin
4toe-M-207
sad. -0.25
ruf. -0.06
dom. -0.00
bre. -0.19
MET chainID: M,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 513.0 Å3
d(Fe-oop): 0.005 Å
MET chainID: N, resSeq: 52,
molecule: Bacterioferritin
4toe-O-207
sad. -0.24
ruf. -0.01
dom. -0.00
bre. -0.26
MET chainID: O,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 502.0 Å3
d(Fe-oop): 0.072 Å
MET chainID: P, resSeq: 52,
molecule: Bacterioferritin
4toe-R-208
sad. -0.20
ruf. +0.02
dom. +0.00
bre. -0.21
MET chainID: Q,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 527.0 Å3
d(Fe-oop): 0.002 Å
MET chainID: R, resSeq: 52,
molecule: Bacterioferritin
4toe-T-206
sad. -0.24
ruf. +0.10
dom. +0.00
bre. -0.13
MET chainID: S,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 501.0 Å3
d(Fe-oop): 0.007 Å
MET chainID: T, resSeq: 52,
molecule: Bacterioferritin
4toe-W-207
sad. -0.25
ruf. -0.12
dom. +0.08
bre. -0.18
MET chainID: W,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 504.0 Å3
d(Fe-oop): 0.033 Å
MET chainID: X, resSeq: 52,
molecule: Bacterioferritin