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PyDISH No: 09824

PDB: 4toc,
chainID: E, resSeq: 207
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.25 Å

axial ligand #1: MET

chainID: E,
resSeq: 52,
Coordination distance[Å]: 2.37
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Pseudomonas aeruginosa

axial ligand #2: MET

chainID: F,
resSeq: 52,
Coordination distance[Å]: 2.365
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Pseudomonas aeruginosa

List of other hemes in pdb:4toc

ID of heme Distortion Axial ligands on heme Function & structure
4toc-A-207
sad. -0.21
ruf. -0.08
dom. +0.03
bre. -0.20
MET chainID: A,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 507.0 Å3
d(Fe-oop): 0.030 Å
MET chainID: B, resSeq: 52,
molecule: Bacterioferritin
4toc-C-205
sad. -0.19
ruf. -0.19
dom. -0.05
bre. -0.22
MET chainID: C,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 507.0 Å3
d(Fe-oop): 0.017 Å
MET chainID: D, resSeq: 52,
molecule: Bacterioferritin
4toc-H-206
sad. -0.21
ruf. -0.04
dom. +0.02
bre. -0.13
MET chainID: G,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 512.0 Å3
d(Fe-oop): 0.029 Å
MET chainID: H, resSeq: 52,
molecule: Bacterioferritin
4toc-J-206
sad. -0.13
ruf. +0.05
dom. -0.04
bre. -0.25
MET chainID: I,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 534.0 Å3
d(Fe-oop): 0.010 Å
MET chainID: J, resSeq: 52,
molecule: Bacterioferritin
4toc-K-206
sad. -0.19
ruf. -0.02
dom. +0.06
bre. -0.29
MET chainID: K,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 500.0 Å3
d(Fe-oop): 0.048 Å
MET chainID: L, resSeq: 52,
molecule: Bacterioferritin
4toc-M-206
sad. -0.18
ruf. -0.07
dom. +0.05
bre. -0.12
MET chainID: M,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 504.0 Å3
d(Fe-oop): 0.015 Å
MET chainID: N, resSeq: 52,
molecule: Bacterioferritin
4toc-P-205
sad. -0.22
ruf. -0.02
dom. -0.03
bre. -0.23
MET chainID: O,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 522.0 Å3
d(Fe-oop): 0.038 Å
MET chainID: P, resSeq: 52,
molecule: Bacterioferritin
4toc-Q-204
sad. -0.21
ruf. +0.03
dom. +0.05
bre. -0.22
MET chainID: Q,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 530.0 Å3
d(Fe-oop): 0.040 Å
MET chainID: R, resSeq: 52,
molecule: Bacterioferritin
4toc-T-206
sad. -0.25
ruf. +0.05
dom. -0.03
bre. -0.23
MET chainID: S,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 510.0 Å3
d(Fe-oop): 0.057 Å
MET chainID: T, resSeq: 52,
molecule: Bacterioferritin
4toc-U-205
sad. -0.24
ruf. -0.08
dom. +0.08
bre. -0.19
MET chainID: U,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 539.0 Å3
d(Fe-oop): 0.054 Å
MET chainID: V, resSeq: 52,
molecule: Bacterioferritin
4toc-W-206
sad. -0.15
ruf. +0.11
dom. +0.08
bre. -0.15
MET chainID: W,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 539.0 Å3
d(Fe-oop): 0.029 Å
MET chainID: X, resSeq: 52,
molecule: Bacterioferritin