Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 18419

PDB: 8yy9,
chainID: C, resSeq: 402
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.7 Å
origomeric count: 39

axial ligand #1: MET

chainID: C,
resSeq: 255,
Coordination distance[Å]: 2.301
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Dinoroseobacter shibae DFL 12 = DSM 16493

axial ligand #2: HIS

chainID: C,
resSeq: 270,
Coordination distance[Å]: 2.091
molecule: same as ligand #1

List of other hemes in pdb:8yy9

ID of heme	Distortion	Axial ligands on heme		Function & structure
8yy9-C-401	`sad. -0.01 ruf. -0.04 dom. -0.17 bre. -0.04`	MET	chainID: C, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 39 pocket vol.: 375.0 Å³ d(Fe-oop): 0.038 Å
8yy9-C-401	`sad. -0.01 ruf. -0.04 dom. -0.17 bre. -0.04`	HIS	chainID: C, resSeq: 173, molecule: Photosynthetic reaction center cytochrome c subunit
8yy9-C-403	`sad. -0.10 ruf. -0.04 dom. +0.33 bre. -0.04`	HIS	chainID: C, resSeq: 158, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 39 pocket vol.: 333.0 Å³ d(Fe-oop): 0.060 Å
8yy9-C-403	`sad. -0.10 ruf. -0.04 dom. +0.33 bre. -0.04`	HIS	chainID: C, resSeq: 332, molecule: Photosynthetic reaction center cytochrome c subunit