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PyDISH No: 18156

PDB: 8ugn,
chainID: 8A, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.7 Å

axial ligand #1: HIS

chainID: 8A,
resSeq: 61,
Coordination distance[Å]: 2.665
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Sus scrofa

axial ligand #2: HIS

chainID: 8A,
resSeq: 378,
Coordination distance[Å]: 2.029
molecule: same as ligand #1

List of other hemes in pdb:8ugn

ID of heme	Distortion	Axial ligands on heme		Function & structure
8ugn-3C-501	`sad. +0.09 ruf. -0.30 dom. +0.01 bre. +0.03`	HIS	chainID: 3C, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 140 pocket vol.: 421.0 Å³ d(Fe-oop): 0.031 Å
8ugn-3C-501	`sad. +0.09 ruf. -0.30 dom. +0.01 bre. +0.03`	HIS	chainID: 3C, resSeq: 182, molecule: Cytochrome b
8ugn-3C-502	`sad. -0.51 ruf. -0.68 dom. +0.30 bre. +0.08`	HIS	chainID: 3C, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 140 pocket vol.: 422.0 Å³ d(Fe-oop): 0.053 Å
8ugn-3C-502	`sad. -0.51 ruf. -0.68 dom. +0.30 bre. +0.08`	HIS	chainID: 3C, resSeq: 196, molecule: Cytochrome b
8ugn-3D-501	`sad. +0.01 ruf. -0.30 dom. +0.34 bre. -0.62`	HIS	chainID: 3D, resSeq: 129, molecule: Cytochrome c1	electron transporter oligomeric count: 140 pocket vol.: 475.0 Å³ d(Fe-oop): 0.125 Å
8ugn-3D-501	`sad. +0.01 ruf. -0.30 dom. +0.34 bre. -0.62`	MET	chainID: 3D, resSeq: 249, molecule: Cytochrome c1
8ugn-3P-501	`sad. +0.14 ruf. -0.37 dom. -0.25 bre. +0.03`	HIS	chainID: 3P, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 140 pocket vol.: 421.0 Å³ d(Fe-oop): 0.044 Å
8ugn-3P-501	`sad. +0.14 ruf. -0.37 dom. -0.25 bre. +0.03`	HIS	chainID: 3P, resSeq: 182, molecule: Cytochrome b
8ugn-3P-502	`sad. -0.49 ruf. -0.65 dom. +0.23 bre. +0.07`	HIS	chainID: 3P, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 140 pocket vol.: 400.0 Å³ d(Fe-oop): 0.072 Å
8ugn-3P-502	`sad. -0.49 ruf. -0.65 dom. +0.23 bre. +0.07`	HIS	chainID: 3P, resSeq: 196, molecule: Cytochrome b
8ugn-3Q-501	`sad. +0.02 ruf. -0.51 dom. +0.27 bre. -0.62`	HIS	chainID: 3Q, resSeq: 41, molecule: Cytochrome c1	electron transporter oligomeric count: 140 pocket vol.: 477.0 Å³ d(Fe-oop): 0.098 Å
8ugn-3Q-501	`sad. +0.02 ruf. -0.51 dom. +0.27 bre. -0.62`	MET	chainID: 3Q, resSeq: 160, molecule: Cytochrome c1
8ugn-4A-604	`sad. -0.74 ruf. +0.64 dom. +0.72 bre. -0.38`	HIS	chainID: 4A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 140 pocket vol.: 637.0 Å³ d(Fe-oop): 0.010 Å
8ugn-4A-604	`sad. -0.74 ruf. +0.64 dom. +0.72 bre. -0.38`	HIS	chainID: 4A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
8ugn-4A-605	`sad. -0.56 ruf. +0.64 dom. +0.66 bre. -0.43`	HIS	chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 140 pocket vol.: 696.0 Å³ d(Fe-oop): 0.002 Å
8ugn-4A-605	`sad. -0.56 ruf. +0.64 dom. +0.66 bre. -0.43`	Not assigned.
8ugn-8A-604	`sad. -0.53 ruf. +0.23 dom. +0.66 bre. -0.46`	HIS	chainID: 8A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 140 pocket vol.: 727.0 Å³ d(Fe-oop): 0.004 Å
8ugn-8A-604	`sad. -0.53 ruf. +0.23 dom. +0.66 bre. -0.46`	Not assigned.