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PyDISH No: 17608

PDB: 8p65,
chainID: P, resSeq: 402
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.0 Å

axial ligand #1: HIS

chainID: P,
resSeq: 97,
Coordination distance[Å]: 2.705
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: P,
resSeq: 196,
Coordination distance[Å]: 2.143
molecule: same as ligand #1

List of other hemes in pdb:8p65

ID of heme Distortion Axial ligands on heme Function & structure
8p65-C-401
sad. -0.09
ruf. -0.12
dom. +0.06
bre. -0.18
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 447.0 Å3
d(Fe-oop): 0.085 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
8p65-C-402
sad. -0.71
ruf. -0.32
dom. +0.72
bre. -0.06
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 410.0 Å3
d(Fe-oop): 0.115 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
8p65-D-301
sad. +0.03
ruf. -0.40
dom. +0.37
bre. -0.19
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 475.0 Å3
d(Fe-oop): 0.090 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
8p65-P-401
sad. -0.06
ruf. -0.14
dom. +0.09
bre. -0.18
HIS chainID: P,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 449.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: P, resSeq: 182,
molecule: Cytochrome b
8p65-Q-301
sad. +0.06
ruf. -0.33
dom. -0.07
bre. -0.20
HIS chainID: Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 492.0 Å3
d(Fe-oop): 0.089 Å
MET chainID: Q, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial