Browser

clear
→ advanced search

PyDISH No: 17400

PDB: 8ird,
chainID: f, resSeq: 101
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: e,
resSeq: 23,
Coordination distance[Å]: 2.082
molecule: Cytochrome b559 subunit alpha
Organism: Thermostichus vulcanus

axial ligand #2: HIS

chainID: f,
resSeq: 24,
Coordination distance[Å]: 2.1
molecule: Cytochrome b559 subunit beta
Organism: Thermostichus vulcanus

List of other hemes in pdb:8ird

ID of heme Distortion Axial ligands on heme Function & structure
8ird-F-102
 sad. +0.82
ruf. -0.11
dom. +0.05
bre. -0.05
 HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha		 electron transporter
oligomeric count: 39
pocket vol.: 478.0 Å3
d(Fe-oop): 0.051 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
8ird-V-201
 sad. +0.34
ruf. -0.37
dom. +0.16
bre. -0.20
 HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550		 electron transporter
oligomeric count: 39
pocket vol.: 443.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
8ird-v-201
 sad. +0.28
ruf. -0.38
dom. +0.15
bre. -0.20
 HIS chainID: v,
resSeq: 41,
molecule: Cytochrome c-550		 electron transporter
oligomeric count: 39
pocket vol.: 431.0 Å3
d(Fe-oop): 0.088 Å
HIS chainID: v, resSeq: 92,
molecule: Cytochrome c-550