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PyDISH No: 17399

PDB: 8ird,
chainID: V, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: V,
resSeq: 41,
Coordination distance[Å]: 2.084
molecule: Cytochrome c-550
Organism: Thermostichus vulcanus

axial ligand #2: HIS

chainID: V,
resSeq: 92,
Coordination distance[Å]: 2.093
molecule: same as ligand #1

List of other hemes in pdb:8ird

ID of heme Distortion Axial ligands on heme Function & structure
8ird-F-102
 sad. +0.82
ruf. -0.11
dom. +0.05
bre. -0.05
 HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha		 electron transporter
oligomeric count: 39
pocket vol.: 478.0 Å3
d(Fe-oop): 0.051 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
8ird-f-101
 sad. +0.67
ruf. -0.37
dom. +0.16
bre. -0.03
 HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha		 electron transporter
oligomeric count: 39
pocket vol.: 489.0 Å3
d(Fe-oop): 0.104 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta
8ird-v-201
 sad. +0.28
ruf. -0.38
dom. +0.15
bre. -0.20
 HIS chainID: v,
resSeq: 41,
molecule: Cytochrome c-550		 electron transporter
oligomeric count: 39
pocket vol.: 431.0 Å3
d(Fe-oop): 0.088 Å
HIS chainID: v, resSeq: 92,
molecule: Cytochrome c-550