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PyDISH No: 17158

PDB: 8gy3,
chainID: A, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 2.7 Å

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 2.287
molecule: Cytochrome c subunit of aldehyde dehydrogenase
EC number: 1.2.99.7
Organism: Gluconobacter oxydans

axial ligand #2: PHE

chainID: A,
resSeq: 125,
Coordination distance[Å]: 3.072
molecule: same as ligand #1

List of other hemes in pdb:8gy3

ID of heme Distortion Axial ligands on heme Function & structure
8gy3-A-502
sad. +0.00
ruf. -0.61
dom. +0.21
bre. -0.04
HIS chainID: A,
resSeq: 211,
molecule: Cytochrome c subunit of aldehyde dehydrogenase
oxidoreductase
oligomeric count: 3
pocket vol.: 352.0 Å3
d(Fe-oop): 0.084 Å
MET chainID: A, resSeq: 273,
molecule: Cytochrome c subunit of aldehyde dehydrogenase
8gy3-A-503
sad. +0.02
ruf. -1.03
dom. +0.10
bre. +0.01
HIS chainID: A,
resSeq: 345,
molecule: Cytochrome c subunit of aldehyde dehydrogenase
oxidoreductase
oligomeric count: 3
pocket vol.: 341.0 Å3
d(Fe-oop): 0.019 Å
MET chainID: A, resSeq: 392,
molecule: Cytochrome c subunit of aldehyde dehydrogenase