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PyDISH No: 17156

PDB: 8gy2,
chainID: B, resSeq: 502
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 2.5 Å
origomeric count: 3

axial ligand #1: HIS

chainID: B,
resSeq: 208,
Coordination distance[Å]: 2.102
molecule: Alcohol dehydrogenase (quinone), cytochrome c subunit
EC number: 1.1.5.5
Organism: Gluconobacter oxydans 621H

axial ligand #2: MET

chainID: B,
resSeq: 277,
Coordination distance[Å]: 2.517
molecule: same as ligand #1

List of other hemes in pdb:8gy2

ID of heme Distortion Axial ligands on heme Function & structure
8gy2-A-801
sad. +0.00
ruf. -0.12
dom. -0.03
bre. -0.08
HIS chainID: A,
resSeq: 657,
molecule: Alcohol dehydrogenase (quinone), dehydrogenase subunit
oxidoreductase
oligomeric count: 3
pocket vol.: 364.0 Å3
d(Fe-oop): 0.022 Å
MET chainID: A, resSeq: 696,
molecule: Alcohol dehydrogenase (quinone), dehydrogenase subunit
8gy2-B-501
sad. -0.03
ruf. -0.80
dom. -0.01
bre. -0.03
HIS chainID: B,
resSeq: 60,
molecule: Alcohol dehydrogenase (quinone), cytochrome c subunit
oxidoreductase
oligomeric count: 3
pocket vol.: 396.0 Å3
d(Fe-oop): 0.000 Å
MET chainID: B, resSeq: 121,
molecule: Alcohol dehydrogenase (quinone), cytochrome c subunit
8gy2-B-503
sad. +0.03
ruf. -0.81
dom. +0.19
bre. -0.05
HIS chainID: B,
resSeq: 344,
molecule: Alcohol dehydrogenase (quinone), cytochrome c subunit
oxidoreductase
oligomeric count: 3
pocket vol.: 331.0 Å3
d(Fe-oop): 0.061 Å
MET chainID: B, resSeq: 394,
molecule: Alcohol dehydrogenase (quinone), cytochrome c subunit