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PyDISH No: 17150

PDB: 8gvm,
chainID: A, resSeq: 601
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 1.851 Å
origomeric count: 13

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 1.982
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: HIS

chainID: A,
resSeq: 378,
Coordination distance[Å]: 1.983
molecule: same as ligand #1

List of other hemes in pdb:8gvm

ID of heme Distortion Axial ligands on heme Function & structure
8gvm-A-602
sad. -0.24
ruf. -0.19
dom. +0.30
bre. -0.09
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 722.0 Å3
d(Fe-oop): 0.084 Å
AZI chainID: A, resSeq: 607,
molecule: AZIDE ION
8gvm-N-602
sad. -0.54
ruf. +0.09
dom. +0.21
bre. -0.05
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 531.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8gvm-N-603
sad. -0.26
ruf. -0.24
dom. +0.33
bre. -0.05
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 13
pocket vol.: 722.0 Å3
d(Fe-oop): 0.091 Å
AZI chainID: N, resSeq: 608,
molecule: AZIDE ION