Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 17150

PDB: 8gvm,
chainID: A, resSeq: 601
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 1.851 Å
origomeric count: 13

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 1.982
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: HIS

chainID: A,
resSeq: 378,
Coordination distance[Å]: 1.983
molecule: same as ligand #1

List of other hemes in pdb:8gvm

ID of heme	Distortion	Axial ligands on heme		Function & structure
8gvm-A-602	`sad. -0.24 ruf. -0.19 dom. +0.30 bre. -0.09`	HIS	chainID: A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 13 pocket vol.: 722.0 Å³ d(Fe-oop): 0.084 Å
8gvm-A-602	`sad. -0.24 ruf. -0.19 dom. +0.30 bre. -0.09`	AZI	chainID: A, resSeq: 607, molecule: AZIDE ION
8gvm-N-602	`sad. -0.54 ruf. +0.09 dom. +0.21 bre. -0.05`	HIS	chainID: N, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 13 pocket vol.: 531.0 Å³ d(Fe-oop): 0.052 Å
8gvm-N-602	`sad. -0.54 ruf. +0.09 dom. +0.21 bre. -0.05`	HIS	chainID: N, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
8gvm-N-603	`sad. -0.26 ruf. -0.24 dom. +0.33 bre. -0.05`	HIS	chainID: N, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 13 pocket vol.: 722.0 Å³ d(Fe-oop): 0.091 Å
8gvm-N-603	`sad. -0.26 ruf. -0.24 dom. +0.33 bre. -0.05`	AZI	chainID: N, resSeq: 608, molecule: AZIDE ION