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PyDISH No: 16831

PDB: 8e5f,
chainID: A, resSeq: 501
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.8 Å

axial ligand #1: HIS

chainID: A,
resSeq: 38,
Coordination distance[Å]: 2.058
molecule: c-type cytochrome
Organism: Pyrobaculum calidifontis

axial ligand #2: HIS

chainID: A,
resSeq: 120,
Coordination distance[Å]: 2.072
molecule: same as ligand #1

List of other hemes in pdb:8e5f

ID of heme Distortion Axial ligands on heme Function & structure
8e5f-A-502
sad. -0.02
ruf. -0.15
dom. +0.04
bre. -0.22
HIS chainID: A,
resSeq: 30,
molecule: c-type cytochrome
electron transporter
oligomeric count: 5
pocket vol.: 453.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: A, resSeq: 89,
molecule: c-type cytochrome
8e5f-A-503
sad. -0.01
ruf. -0.10
dom. +0.02
bre. -0.20
HIS chainID: A,
resSeq: 116,
molecule: c-type cytochrome
electron transporter
oligomeric count: 5
pocket vol.: 541.0 Å3
d(Fe-oop): 0.007 Å
Not assigned.
8e5f-A-504
sad. +0.04
ruf. -0.12
dom. -0.11
bre. -0.21
HIS chainID: A,
resSeq: 104,
molecule: c-type cytochrome
electron transporter
oligomeric count: 5
pocket vol.: 559.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: A, resSeq: 308,
molecule: c-type cytochrome