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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.941 Å
axial ligand #1: LYS
chainID: C,resSeq: 137,
Coordination distance[Å]: 2.239
molecule: Nitrite reductase (cytochrome; ammonia-forming)
EC number: 1.7.2.2
Organism: Geobacter metallireducens GS-15
axial ligand #2: HOH
chainID: C,resSeq: 613,
Coordination distance[Å]: 2.148
molecule: water
List of other hemes in pdb:8bcx
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8bcx-A-501 |
sad. -0.13 ruf. -0.38 dom. -0.14 bre. -0.29 |
HIS | chainID: A, resSeq: 294, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 581.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: A, resSeq: 336, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-A-502 |
sad. +0.31 ruf. -0.42 dom. +0.04 bre. -0.32 |
LYS | chainID: A, resSeq: 137, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 532.0 Å3 d(Fe-oop): 0.066 Å |
| HOH | chainID: A, resSeq: 619, molecule: water |
|||
8bcx-A-503 |
sad. +0.37 ruf. -1.07 dom. -0.07 bre. -0.20 |
HIS | chainID: A, resSeq: 305, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 435.0 Å3 d(Fe-oop): 0.008 Å |
| HIS | chainID: A, resSeq: 416, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-A-504 |
sad. -0.40 ruf. -0.71 dom. -0.08 bre. -0.25 |
HIS | chainID: A, resSeq: 112, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 538.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: A, resSeq: 222, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-A-505 |
sad. +0.38 ruf. -0.57 dom. -0.27 bre. -0.29 |
HIS | chainID: A, resSeq: 179, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 439.0 Å3 d(Fe-oop): 0.064 Å |
| HIS | chainID: A, resSeq: 319, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-B-501 |
sad. +0.25 ruf. -0.27 dom. +0.10 bre. -0.32 |
LYS | chainID: B, resSeq: 137, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 521.0 Å3 d(Fe-oop): 0.102 Å |
| HOH | chainID: B, resSeq: 614, molecule: water |
|||
8bcx-B-502 |
sad. +0.50 ruf. -1.05 dom. -0.01 bre. -0.22 |
HIS | chainID: B, resSeq: 305, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 459.0 Å3 d(Fe-oop): 0.057 Å |
| HIS | chainID: B, resSeq: 416, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-B-503 |
sad. -0.25 ruf. -0.41 dom. -0.03 bre. -0.29 |
HIS | chainID: B, resSeq: 294, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 570.0 Å3 d(Fe-oop): 0.047 Å |
| HIS | chainID: B, resSeq: 336, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-B-504 |
sad. -0.41 ruf. -0.71 dom. -0.04 bre. -0.25 |
HIS | chainID: B, resSeq: 112, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 533.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: B, resSeq: 222, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-B-505 |
sad. +0.34 ruf. -0.59 dom. -0.27 bre. -0.29 |
HIS | chainID: B, resSeq: 179, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 456.0 Å3 d(Fe-oop): 0.083 Å |
| HIS | chainID: B, resSeq: 319, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-C-501 |
sad. -0.10 ruf. -0.67 dom. -0.06 bre. -0.26 |
HIS | chainID: C, resSeq: 294, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 555.0 Å3 d(Fe-oop): 0.041 Å |
| HIS | chainID: C, resSeq: 336, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-C-502 |
sad. +0.57 ruf. -1.07 dom. +0.02 bre. -0.20 |
HIS | chainID: C, resSeq: 305, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 446.0 Å3 d(Fe-oop): 0.082 Å |
| HIS | chainID: C, resSeq: 416, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-C-504 |
sad. -0.41 ruf. -0.67 dom. -0.07 bre. -0.25 |
HIS | chainID: C, resSeq: 112, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 489.0 Å3 d(Fe-oop): 0.032 Å |
| HIS | chainID: C, resSeq: 222, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-C-505 |
sad. +0.37 ruf. -0.61 dom. -0.26 bre. -0.27 |
HIS | chainID: C, resSeq: 179, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 422.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: C, resSeq: 319, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-D-501 |
sad. +0.41 ruf. -0.53 dom. -0.27 bre. -0.22 |
HIS | chainID: D, resSeq: 179, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 411.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: D, resSeq: 319, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-D-502 |
sad. -0.23 ruf. -0.64 dom. -0.03 bre. -0.25 |
HIS | chainID: D, resSeq: 294, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 584.0 Å3 d(Fe-oop): 0.052 Å |
| HIS | chainID: D, resSeq: 336, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-D-503 |
sad. +0.43 ruf. -1.14 dom. -0.01 bre. -0.18 |
HIS | chainID: D, resSeq: 305, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 444.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: D, resSeq: 416, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-D-504 |
sad. -0.40 ruf. -0.70 dom. -0.06 bre. -0.25 |
HIS | chainID: D, resSeq: 112, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 496.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: D, resSeq: 222, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
|||
8bcx-D-505 |
sad. +0.28 ruf. -0.31 dom. +0.12 bre. -0.31 |
LYS | chainID: D, resSeq: 137, molecule: Nitrite reductase (cytochrome; ammonia-forming) |
oxidoreductase oligomeric count: 1 pocket vol.: 459.0 Å3 d(Fe-oop): 0.112 Å |
| HOH | chainID: D, resSeq: 616, molecule: water |
|||