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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 3.0 Å
axial ligand #1: HIS
chainID: C,resSeq: 96,
Coordination distance[Å]: 2.211
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: C,resSeq: 197,
Coordination distance[Å]: 2.146
molecule: same as ligand #1
List of other hemes in pdb:8abh
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abh-C-501 |
sad. +0.03 ruf. -0.22 dom. -0.03 bre. +0.20 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 380.0 Å3 d(Fe-oop): 0.021 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
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8abh-D-401 |
sad. -0.06 ruf. -0.59 dom. +0.05 bre. -0.19 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 414.0 Å3 d(Fe-oop): 0.013 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abh-N-501 |
sad. +0.05 ruf. -0.21 dom. -0.06 bre. +0.21 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 399.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8abh-N-502 |
sad. -0.61 ruf. -0.33 dom. +0.02 bre. +0.28 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 368.0 Å3 d(Fe-oop): 0.089 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8abh-O-401 |
sad. -0.05 ruf. -0.61 dom. +0.06 bre. -0.20 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
translocase oligomeric count: 20 pocket vol.: 398.0 Å3 d(Fe-oop): 0.025 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
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