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Protein data
function: oxidoreductaseexperiment: ELECTRON MICROSCOPY
resolution: 2.3 Å
axial ligand #1: HIS
chainID: N,resSeq: 82,
Coordination distance[Å]: 2.039
molecule: Cytochrome b
Organism: Yarrowia lipolytica
axial ligand #2: HIS
chainID: N,resSeq: 183,
Coordination distance[Å]: 2.075
molecule: same as ligand #1
List of other hemes in pdb:8abf
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8abf-C-501 |
sad. +0.10 ruf. -0.29 dom. -0.06 bre. +0.03 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 372.0 Å3 d(Fe-oop): 0.028 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8abf-C-502 |
sad. -0.57 ruf. -0.35 dom. +0.11 bre. +0.02 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 397.0 Å3 d(Fe-oop): 0.077 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8abf-D-401 |
sad. -0.07 ruf. -0.46 dom. +0.01 bre. -0.22 |
HIS | chainID: D, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 407.0 Å3 d(Fe-oop): 0.004 Å |
| MET | chainID: D, resSeq: 248, molecule: YALI0A17468p |
|||
8abf-N-502 |
sad. -0.58 ruf. -0.39 dom. +0.11 bre. +0.12 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
oxidoreductase oligomeric count: 20 pocket vol.: 381.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||
8abf-O-401 |
sad. -0.05 ruf. -0.46 dom. +0.05 bre. -0.26 |
HIS | chainID: O, resSeq: 128, molecule: YALI0A17468p |
oxidoreductase oligomeric count: 20 pocket vol.: 428.0 Å3 d(Fe-oop): 0.024 Å |
| MET | chainID: O, resSeq: 248, molecule: YALI0A17468p |
|||