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PyDISH No: 16504

PDB: 7zxy,
chainID: C, resSeq: 301
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.15 Å

axial ligand #1: TYR

chainID: C,
resSeq: 1,
Coordination distance[Å]: 2.665
molecule: Cytochrome f
Organism: Synechocystis sp. PCC 6803

axial ligand #2: HIS

chainID: C,
resSeq: 26,
Coordination distance[Å]: 2.325
molecule: same as ligand #1

List of other hemes in pdb:7zxy

ID of heme Distortion Axial ligands on heme Function & structure
7zxy-A-302
sad. -0.09
ruf. +0.47
dom. +0.40
bre. -0.11
HIS chainID: A,
resSeq: 93,
molecule: Cytochrome b6
electron transporter
oligomeric count: 16
pocket vol.: 352.0 Å3
d(Fe-oop): 0.194 Å
HIS chainID: A, resSeq: 194,
molecule: Cytochrome b6
7zxy-A-303
sad. -0.99
ruf. -0.29
dom. +0.10
bre. -0.07
HIS chainID: A,
resSeq: 107,
molecule: Cytochrome b6
electron transporter
oligomeric count: 16
pocket vol.: 363.0 Å3
d(Fe-oop): 0.057 Å
HIS chainID: A, resSeq: 209,
molecule: Cytochrome b6
7zxy-A-304
sad. +0.00
ruf. -0.44
dom. -0.32
bre. -0.15
Not assigned. unclassified
oligomeric count: 16
pocket vol.: 524.0 Å3
d(Fe-oop): 0.066 Å
Not assigned.
7zxy-I-303
sad. -0.28
ruf. -0.04
dom. -0.06
bre. -0.17
HIS chainID: I,
resSeq: 93,
molecule: Cytochrome b6
electron transporter
oligomeric count: 16
pocket vol.: 337.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: I, resSeq: 194,
molecule: Cytochrome b6
7zxy-I-304
sad. -0.96
ruf. -0.34
dom. +0.08
bre. -0.09
HIS chainID: I,
resSeq: 107,
molecule: Cytochrome b6
electron transporter
oligomeric count: 16
pocket vol.: 359.0 Å3
d(Fe-oop): 0.021 Å
HIS chainID: I, resSeq: 209,
molecule: Cytochrome b6
7zxy-I-305
sad. -0.00
ruf. -0.23
dom. -0.50
bre. -0.11
Not assigned. unclassified
oligomeric count: 16
pocket vol.: 551.0 Å3
d(Fe-oop): 0.046 Å
Not assigned.
7zxy-K-301
sad. -0.21
ruf. -0.27
dom. +0.12
bre. -0.21
TYR chainID: K,
resSeq: 1,
molecule: Cytochrome f
electron transporter
oligomeric count: 16
pocket vol.: 332.0 Å3
d(Fe-oop): 0.126 Å
HIS chainID: K, resSeq: 26,
molecule: Cytochrome f