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PyDISH No: 14908

PDB: 7dgs,
chainID: y, resSeq: 402
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 7.8 Å

axial ligand #1: HIS

chainID: y,
resSeq: 97,
Coordination distance[Å]: 2.335
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: y,
resSeq: 196,
Coordination distance[Å]: 2.471
molecule: same as ligand #1

List of other hemes in pdb:7dgs

ID of heme	Distortion	Axial ligands on heme		Function & structure
7dgs-m-401	`sad. +0.40 ruf. -1.49 dom. +0.63 bre. +1.05`	HIS	chainID: m, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 479.0 Å³ d(Fe-oop): 0.109 Å
7dgs-m-401	`sad. +0.40 ruf. -1.49 dom. +0.63 bre. +1.05`	HIS	chainID: m, resSeq: 182, molecule: Cytochrome b
7dgs-m-402	`sad. -0.12 ruf. -0.92 dom. +0.55 bre. +0.68`	HIS	chainID: m, resSeq: 97, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 485.0 Å³ d(Fe-oop): 0.341 Å
7dgs-m-402	`sad. -0.12 ruf. -0.92 dom. +0.55 bre. +0.68`	HIS	chainID: m, resSeq: 196, molecule: Cytochrome b
7dgs-o-301	`sad. +0.07 ruf. -2.05 dom. +0.24 bre. +0.92`	HIS	chainID: o, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 80 pocket vol.: 504.0 Å³ d(Fe-oop): 0.515 Å
7dgs-o-301	`sad. +0.07 ruf. -2.05 dom. +0.24 bre. +0.92`	MET	chainID: o, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
7dgs-y-401	`sad. +0.40 ruf. -1.49 dom. +0.63 bre. +1.05`	HIS	chainID: y, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 492.0 Å³ d(Fe-oop): 0.109 Å
7dgs-y-401	`sad. +0.40 ruf. -1.49 dom. +0.63 bre. +1.05`	HIS	chainID: y, resSeq: 182, molecule: Cytochrome b
7dgs-z-301	`sad. +0.07 ruf. -2.05 dom. +0.24 bre. +0.92`	HIS	chainID: z, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 80 pocket vol.: 497.0 Å³ d(Fe-oop): 0.514 Å
7dgs-z-301	`sad. +0.07 ruf. -2.05 dom. +0.24 bre. +0.92`	MET	chainID: z, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
7dgs-A9-601	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: A9, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 80 pocket vol.: 616.0 Å³ d(Fe-oop): 0.041 Å
7dgs-A9-601	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: A9, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
7dgs-A9-602	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	HIS	chainID: A9, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 80 pocket vol.: 754.0 Å³ d(Fe-oop): 0.024 Å
7dgs-A9-602	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	Not assigned.