Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 13275

PDB: 6lod,
chainID: E, resSeq: 202
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.2 Å

axial ligand #1: HIS

chainID: E,
resSeq: 117,
Coordination distance[Å]: 2.323
molecule: Cytochrome c domain-containing protein
Organism: Roseiflexus castenholzii (strain DSM 13941 / HLO8)

axial ligand #2: MET

chainID: E,
resSeq: 162,
Coordination distance[Å]: 2.192
molecule: same as ligand #1

List of other hemes in pdb:6lod

ID of heme	Distortion	Axial ligands on heme		Function & structure
6lod-A-301	`sad. +0.01 ruf. -0.07 dom. -0.02 bre. -0.17`	HIS	chainID: A, resSeq: 66, molecule: MULTIHEME_CYTC domain-containing protein	oxidoreductase oligomeric count: 6 pocket vol.: 446.0 Å³ d(Fe-oop): 0.045 Å
6lod-A-301	`sad. +0.01 ruf. -0.07 dom. -0.02 bre. -0.17`	HIS	chainID: A, resSeq: 98, molecule: MULTIHEME_CYTC domain-containing protein
6lod-A-302	`sad. +0.01 ruf. +0.10 dom. +0.08 bre. -0.14`	MET	chainID: A, resSeq: 168, molecule: MULTIHEME_CYTC domain-containing protein	oxidoreductase oligomeric count: 6 pocket vol.: 313.0 Å³ d(Fe-oop): 0.211 Å
6lod-A-302	`sad. +0.01 ruf. +0.10 dom. +0.08 bre. -0.14`	HIS	chainID: A, resSeq: 225, molecule: MULTIHEME_CYTC domain-containing protein
6lod-A-303	`sad. -0.02 ruf. -0.43 dom. +0.24 bre. -0.01`	HIS	chainID: A, resSeq: 137, molecule: MULTIHEME_CYTC domain-containing protein	oxidoreductase oligomeric count: 6 pocket vol.: 394.0 Å³ d(Fe-oop): 0.158 Å
6lod-A-303	`sad. -0.02 ruf. -0.43 dom. +0.24 bre. -0.01`	HIS	chainID: A, resSeq: 151, molecule: MULTIHEME_CYTC domain-containing protein
6lod-A-304	`sad. +0.14 ruf. -0.17 dom. +0.16 bre. -0.16`	HIS	chainID: A, resSeq: 63, molecule: MULTIHEME_CYTC domain-containing protein	oxidoreductase oligomeric count: 6 pocket vol.: 378.0 Å³ d(Fe-oop): 0.040 Å
6lod-A-304	`sad. +0.14 ruf. -0.17 dom. +0.16 bre. -0.16`	HIS	chainID: A, resSeq: 77, molecule: MULTIHEME_CYTC domain-containing protein
6lod-B-1101	`sad. -0.13 ruf. -0.04 dom. +0.17 bre. -0.09`	HIS	chainID: A, resSeq: 140, molecule: MULTIHEME_CYTC domain-containing protein	oxidoreductase oligomeric count: 6 pocket vol.: 381.0 Å³ d(Fe-oop): 0.029 Å
6lod-B-1101	`sad. -0.13 ruf. -0.04 dom. +0.17 bre. -0.09`	HIS	chainID: A, resSeq: 175, molecule: MULTIHEME_CYTC domain-containing protein