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PyDISH No: 12023

PDB: 5zcq,
chainID: N, resSeq: 601
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.65 Å

axial ligand #1: HIS

chainID: N,
resSeq: 61,
Coordination distance[Å]: 1.993
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: N,
resSeq: 378,
Coordination distance[Å]: 2.034
molecule: same as ligand #1

List of other hemes in pdb:5zcq

ID of heme Distortion Axial ligands on heme Function & structure
5zcq-A-601
sad. -0.59
ruf. +0.04
dom. +0.22
bre. -0.06
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 550.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5zcq-A-602
sad. -0.39
ruf. -0.13
dom. +0.41
bre. -0.13
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 723.0 Å3
d(Fe-oop): 0.033 Å
AZI chainID: A, resSeq: 607,
molecule: AZIDE ION
5zcq-N-602
sad. -0.36
ruf. -0.10
dom. +0.42
bre. -0.14
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 698.0 Å3
d(Fe-oop): 0.042 Å
AZI chainID: N, resSeq: 607,
molecule: AZIDE ION