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PyDISH No: 12020

PDB: 5zcp,
chainID: N, resSeq: 603
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.65 Å

axial ligand #1: HIS

chainID: N,
resSeq: 376,
Coordination distance[Å]: 2.14
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: AZI

chainID: N,
resSeq: 607,
Coordination distance[Å]: 2.008
molecule: AZIDE ION

List of other hemes in pdb:5zcp

ID of heme Distortion Axial ligands on heme Function & structure
5zcp-A-601
sad. -0.58
ruf. +0.07
dom. +0.18
bre. -0.08
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 543.0 Å3
d(Fe-oop): 0.023 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5zcp-A-602
sad. -0.46
ruf. +0.08
dom. +0.34
bre. -0.14
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 711.0 Å3
d(Fe-oop): 0.026 Å
AZI chainID: A, resSeq: 606,
molecule: AZIDE ION
5zcp-N-602
sad. -0.57
ruf. +0.11
dom. +0.21
bre. -0.03
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 534.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1