Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 11972

PDB: 5yem,
chainID: B, resSeq: 703
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.49 Å
origomeric count: 4

axial ligand #1: TYR

chainID: B,
resSeq: 369,
Coordination distance[Å]: 2.058
molecule: Catalase
EC number: 1.11.1.6
Organism: Mycothermus thermophilus

axial ligand #2: HOH

chainID: B,
resSeq: 1249,
Coordination distance[Å]: 2.687
molecule: water

List of other hemes in pdb:5yem

ID of heme	Distortion	Axial ligands on heme		Function & structure
5yem-A-704	`sad. -0.09 ruf. -0.42 dom. -0.01 bre. -0.12`	TYR	chainID: A, resSeq: 369, molecule: Catalase	oxidoreductase oligomeric count: 4 pocket vol.: 361.0 Å³ d(Fe-oop): 0.065 Å
5yem-A-704	`sad. -0.09 ruf. -0.42 dom. -0.01 bre. -0.12`	HOH	chainID: A, resSeq: 1277, molecule: water
5yem-C-703	`sad. -0.07 ruf. -0.44 dom. -0.02 bre. -0.23`	TYR	chainID: C, resSeq: 369, molecule: Catalase	oxidoreductase oligomeric count: 4 pocket vol.: 361.0 Å³ d(Fe-oop): 0.067 Å
5yem-C-703	`sad. -0.07 ruf. -0.44 dom. -0.02 bre. -0.23`	HOH	chainID: C, resSeq: 1264, molecule: water
5yem-D-703	`sad. -0.08 ruf. -0.46 dom. -0.05 bre. -0.17`	TYR	chainID: D, resSeq: 369, molecule: Catalase	oxidoreductase oligomeric count: 4 pocket vol.: 357.0 Å³ d(Fe-oop): 0.066 Å
5yem-D-703	`sad. -0.08 ruf. -0.46 dom. -0.05 bre. -0.17`	HOH	chainID: D, resSeq: 1218, molecule: water