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PyDISH No: 11262

PDB: 5m7l,
chainID: A, resSeq: 401
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.6 Å

axial ligand #1: MET

chainID: A,
resSeq: 74,
Coordination distance[Å]: 2.886
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: A,
resSeq: 91,
Coordination distance[Å]: 2.614
molecule: same as ligand #1

List of other hemes in pdb:5m7l

ID of heme Distortion Axial ligands on heme Function & structure
5m7l-A-402
sad. +0.32
ruf. -0.61
dom. +0.45
bre. -0.08
MET chainID: A,
resSeq: 110,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 384.0 Å3
d(Fe-oop): 0.170 Å
HIS chainID: A, resSeq: 136,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7l-A-403
sad. +0.46
ruf. -0.73
dom. +0.57
bre. -0.09
MET chainID: A,
resSeq: 233,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 355.0 Å3
d(Fe-oop): 0.228 Å
HIS chainID: A, resSeq: 248,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7l-A-404
sad. +0.24
ruf. -0.06
dom. +0.43
bre. -0.20
HIS chainID: A,
resSeq: 124,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 398.0 Å3
d(Fe-oop): 0.086 Å
HIS chainID: A, resSeq: 309,
molecule: Photosynthetic reaction center cytochrome c subunit