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PyDISH No: 11261

PDB: 5m7k,
chainID: A, resSeq: 404
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 124,
Coordination distance[Å]: 2.392
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: A,
resSeq: 309,
Coordination distance[Å]: 2.331
molecule: same as ligand #1

List of other hemes in pdb:5m7k

ID of heme Distortion Axial ligands on heme Function & structure
5m7k-A-401
sad. +0.37
ruf. -0.17
dom. +0.49
bre. -0.15
MET chainID: A,
resSeq: 74,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 398.0 Å3
d(Fe-oop): 0.198 Å
HIS chainID: A, resSeq: 91,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7k-A-402
sad. +0.23
ruf. -0.49
dom. +0.42
bre. -0.09
MET chainID: A,
resSeq: 110,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 392.0 Å3
d(Fe-oop): 0.192 Å
HIS chainID: A, resSeq: 136,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7k-A-403
sad. +0.15
ruf. -0.68
dom. +0.25
bre. -0.13
MET chainID: A,
resSeq: 233,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 358.0 Å3
d(Fe-oop): 0.084 Å
HIS chainID: A, resSeq: 248,
molecule: Photosynthetic reaction center cytochrome c subunit