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PyDISH No: 11254

PDB: 5m7j,
chainID: A, resSeq: 401
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.5 Å

axial ligand #1: MET

chainID: A,
resSeq: 74,
Coordination distance[Å]: 2.872
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: A,
resSeq: 91,
Coordination distance[Å]: 2.522
molecule: same as ligand #1

List of other hemes in pdb:5m7j

ID of heme Distortion Axial ligands on heme Function & structure
5m7j-A-402
sad. +0.26
ruf. -0.56
dom. +0.41
bre. -0.08
MET chainID: A,
resSeq: 110,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 401.0 Å3
d(Fe-oop): 0.246 Å
HIS chainID: A, resSeq: 136,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7j-A-403
sad. +0.23
ruf. -0.74
dom. +0.33
bre. -0.09
MET chainID: A,
resSeq: 233,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 356.0 Å3
d(Fe-oop): 0.156 Å
HIS chainID: A, resSeq: 248,
molecule: Photosynthetic reaction center cytochrome c subunit
5m7j-A-404
sad. +0.08
ruf. +0.16
dom. +0.50
bre. -0.12
HIS chainID: A,
resSeq: 124,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 429.0 Å3
d(Fe-oop): 0.055 Å
HIS chainID: A, resSeq: 309,
molecule: Photosynthetic reaction center cytochrome c subunit