Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 11257

PDB: 5m7j,
chainID: A, resSeq: 404
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 124,
Coordination distance[Å]: 2.415
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: A,
resSeq: 309,
Coordination distance[Å]: 2.327
molecule: same as ligand #1

List of other hemes in pdb:5m7j

ID of heme	Distortion	Axial ligands on heme		Function & structure
5m7j-A-401	`sad. +0.40 ruf. -0.15 dom. +0.48 bre. -0.13`	MET	chainID: A, resSeq: 74, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 398.0 Å³ d(Fe-oop): 0.172 Å
5m7j-A-401	`sad. +0.40 ruf. -0.15 dom. +0.48 bre. -0.13`	HIS	chainID: A, resSeq: 91, molecule: Photosynthetic reaction center cytochrome c subunit
5m7j-A-402	`sad. +0.26 ruf. -0.56 dom. +0.41 bre. -0.08`	MET	chainID: A, resSeq: 110, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 401.0 Å³ d(Fe-oop): 0.246 Å
5m7j-A-402	`sad. +0.26 ruf. -0.56 dom. +0.41 bre. -0.08`	HIS	chainID: A, resSeq: 136, molecule: Photosynthetic reaction center cytochrome c subunit
5m7j-A-403	`sad. +0.23 ruf. -0.74 dom. +0.33 bre. -0.09`	MET	chainID: A, resSeq: 233, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 356.0 Å³ d(Fe-oop): 0.156 Å
5m7j-A-403	`sad. +0.23 ruf. -0.74 dom. +0.33 bre. -0.09`	HIS	chainID: A, resSeq: 248, molecule: Photosynthetic reaction center cytochrome c subunit