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PyDISH No: 10517

PDB: 5cif,
chainID: C, resSeq: 301
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.01 Å
origomeric count: 2

axial ligand #1: HIS

chainID: C,
resSeq: 175,
Coordination distance[Å]: 2.043
molecule: Cytochrome c peroxidase, mitochondrial
EC number: 1.11.1.5
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: HOH

chainID: C,
resSeq: 514,
Coordination distance[Å]: 2.825
molecule: water

List of other hemes in pdb:5cif

ID of heme Distortion Axial ligands on heme Function & structure
5cif-A-301
sad. -0.82
ruf. +0.41
dom. +0.05
bre. -0.19
HIS chainID: A,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 441.0 Å3
d(Fe-oop): 0.210 Å
Not assigned.
5cif-B-201
sad. +0.13
ruf. -1.22
dom. +0.15
bre. -0.11
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 2
pocket vol.: 300.0 Å3
d(Fe-oop): 0.045 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c iso-1
5cif-D-201
sad. +0.13
ruf. -1.12
dom. +0.06
bre. -0.10
HIS chainID: D,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 2
pocket vol.: 329.0 Å3
d(Fe-oop): 0.060 Å
MET chainID: D, resSeq: 80,
molecule: Cytochrome c iso-1