Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 10518

PDB: 5cif,
chainID: D, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.01 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.004
molecule: Cytochrome c iso-1
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.257
molecule: same as ligand #1

List of other hemes in pdb:5cif

ID of heme	Distortion	Axial ligands on heme		Function & structure
5cif-A-301	`sad. -0.82 ruf. +0.41 dom. +0.05 bre. -0.19`	HIS	chainID: A, resSeq: 175, molecule: Cytochrome c peroxidase, mitochondrial	oxidoreductase oligomeric count: 2 pocket vol.: 441.0 Å³ d(Fe-oop): 0.210 Å
5cif-A-301	`sad. -0.82 ruf. +0.41 dom. +0.05 bre. -0.19`	Not assigned.
5cif-B-201	`sad. +0.13 ruf. -1.22 dom. +0.15 bre. -0.11`	HIS	chainID: B, resSeq: 18, molecule: Cytochrome c iso-1	electron transporter oligomeric count: 2 pocket vol.: 300.0 Å³ d(Fe-oop): 0.045 Å
5cif-B-201	`sad. +0.13 ruf. -1.22 dom. +0.15 bre. -0.11`	MET	chainID: B, resSeq: 80, molecule: Cytochrome c iso-1
5cif-C-301	`sad. -0.79 ruf. +0.43 dom. +0.13 bre. -0.21`	HIS	chainID: C, resSeq: 175, molecule: Cytochrome c peroxidase, mitochondrial	oxidoreductase oligomeric count: 2 pocket vol.: 431.0 Å³ d(Fe-oop): 0.195 Å
5cif-C-301	`sad. -0.79 ruf. +0.43 dom. +0.13 bre. -0.21`	HOH	chainID: C, resSeq: 514, molecule: water