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PyDISH No: 10426

PDB: 5b5m,
chainID: C, resSeq: 501
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.3 Å

axial ligand #1: MET

chainID: C,
resSeq: 94,
Coordination distance[Å]: 2.435
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Thermochromatium tepidum

axial ligand #2: HIS

chainID: C,
resSeq: 111,
Coordination distance[Å]: 2.265
molecule: same as ligand #1

List of other hemes in pdb:5b5m

ID of heme	Distortion	Axial ligands on heme		Function & structure
5b5m-C-502	`sad. -0.00 ruf. -0.02 dom. -0.02 bre. -0.07`	MET	chainID: C, resSeq: 130, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 369.0 Å³ d(Fe-oop): 0.152 Å
5b5m-C-502	`sad. -0.00 ruf. -0.02 dom. -0.02 bre. -0.07`	HIS	chainID: C, resSeq: 156, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-C-503	`sad. -0.01 ruf. -0.00 dom. -0.02 bre. -0.15`	MET	chainID: C, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 345.0 Å³ d(Fe-oop): 0.146 Å
5b5m-C-503	`sad. -0.01 ruf. -0.00 dom. -0.02 bre. -0.15`	HIS	chainID: C, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-C-504	`sad. -0.00 ruf. -0.01 dom. -0.05 bre. -0.06`	HIS	chainID: C, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 372.0 Å³ d(Fe-oop): 0.176 Å
5b5m-C-504	`sad. -0.00 ruf. -0.01 dom. -0.05 bre. -0.06`	HIS	chainID: C, resSeq: 311, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-o-501	`sad. -0.01 ruf. +0.00 dom. -0.02 bre. -0.16`	MET	chainID: o, resSeq: 94, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 380.0 Å³ d(Fe-oop): 0.152 Å
5b5m-o-501	`sad. -0.01 ruf. +0.00 dom. -0.02 bre. -0.16`	HIS	chainID: o, resSeq: 111, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-o-502	`sad. -0.01 ruf. -0.01 dom. -0.02 bre. -0.11`	MET	chainID: o, resSeq: 130, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 372.0 Å³ d(Fe-oop): 0.145 Å
5b5m-o-502	`sad. -0.01 ruf. -0.01 dom. -0.02 bre. -0.11`	HIS	chainID: o, resSeq: 156, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-o-503	`sad. -0.01 ruf. -0.02 dom. -0.02 bre. -0.23`	MET	chainID: o, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 335.0 Å³ d(Fe-oop): 0.149 Å
5b5m-o-503	`sad. -0.01 ruf. -0.02 dom. -0.02 bre. -0.23`	HIS	chainID: o, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit
5b5m-o-504	`sad. -0.01 ruf. +0.01 dom. -0.01 bre. -0.16`	HIS	chainID: o, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 391.0 Å³ d(Fe-oop): 0.139 Å
5b5m-o-504	`sad. -0.01 ruf. +0.01 dom. -0.01 bre. -0.16`	HIS	chainID: o, resSeq: 311, molecule: Photosynthetic reaction center cytochrome c subunit