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PyDISH No: 09392

PDB: 4pd4,
chainID: D, resSeq: 401
heme type: B

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 3.04 Å

axial ligand #1: HIS

chainID: D,
resSeq: 105,
Coordination distance[Å]: 2.182
molecule: Cytochrome c1, heme protein, mitochondrial
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 225,
Coordination distance[Å]: 2.136
molecule: same as ligand #1

List of other hemes in pdb:4pd4

ID of heme	Distortion	Axial ligands on heme		Function & structure
4pd4-C-4001	`sad. -0.05 ruf. -0.30 dom. +0.15 bre. -0.28`	HIS	chainID: C, resSeq: 82, molecule: Cytochrome b	translocase oligomeric count: 22 pocket vol.: 390.0 Å³ d(Fe-oop): 0.035 Å
4pd4-C-4001	`sad. -0.05 ruf. -0.30 dom. +0.15 bre. -0.28`	HIS	chainID: C, resSeq: 183, molecule: Cytochrome b
4pd4-C-4002	`sad. -0.62 ruf. -1.20 dom. -0.03 bre. -0.01`	HIS	chainID: C, resSeq: 96, molecule: Cytochrome b	translocase oligomeric count: 22 pocket vol.: 383.0 Å³ d(Fe-oop): 0.074 Å
4pd4-C-4002	`sad. -0.62 ruf. -1.20 dom. -0.03 bre. -0.01`	HIS	chainID: C, resSeq: 197, molecule: Cytochrome b