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PyDISH No: 07570

PDB: 3ved,
chainID: B, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å
origomeric count: 6

axial ligand #1: HIS

chainID: B,
resSeq: 226,
Coordination distance[Å]: 2.027
molecule: DypB
EC number: 1.11.1.-
Organism: Rhodococcus jostii

axial ligand #2: CL

chainID: B,
resSeq: 403,
Coordination distance[Å]: 2.673
molecule: CHLORIDE ION

List of other hemes in pdb:3ved

ID of heme Distortion Axial ligands on heme Function & structure
3ved-A-401
sad. +0.22
ruf. -0.02
dom. +0.00
bre. -0.16
HIS chainID: A,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 398.0 Å3
d(Fe-oop): 0.007 Å
CL chainID: A, resSeq: 404,
molecule: CHLORIDE ION
3ved-C-401
sad. +0.29
ruf. -0.02
dom. -0.03
bre. -0.16
HIS chainID: C,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 406.0 Å3
d(Fe-oop): 0.006 Å
CL chainID: C, resSeq: 403,
molecule: CHLORIDE ION