Browser

PyDISH No: 07569

PDB: 3ved,
chainID: A, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å
origomeric count: 6

axial ligand #1: HIS

chainID: A,
resSeq: 226,
Coordination distance[Å]: 1.983
molecule: DypB
EC number: 1.11.1.-
Organism: Rhodococcus jostii

axial ligand #2: CL

chainID: A,
resSeq: 404,
Coordination distance[Å]: 2.695
molecule: CHLORIDE ION

List of other hemes in pdb:3ved

ID of heme Distortion Axial ligands on heme Function & structure
3ved-B-401
sad. +0.21
ruf. +0.05
dom. +0.00
bre. +0.00
HIS chainID: B,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 410.0 Å3
d(Fe-oop): 0.003 Å
CL chainID: B, resSeq: 403,
molecule: CHLORIDE ION
3ved-C-401
sad. +0.29
ruf. -0.02
dom. -0.03
bre. -0.16
HIS chainID: C,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 406.0 Å3
d(Fe-oop): 0.006 Å
CL chainID: C, resSeq: 403,
molecule: CHLORIDE ION