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PyDISH No: 06136

PDB: 3l73,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.04 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 1.998
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
EC number: 1.10.2.2
Organism: GALLUS GALLUS

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.155
molecule: same as ligand #1

List of other hemes in pdb:3l73

ID of heme Distortion Axial ligands on heme Function & structure
3l73-C-501
sad. +0.06
ruf. -0.11
dom. -0.16
bre. +0.16
HIS chainID: C,
resSeq: 84,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 424.0 Å3
d(Fe-oop): 0.042 Å
HIS chainID: C, resSeq: 183,
molecule: CYTOCHROME B
3l73-C-502
sad. -0.62
ruf. -0.36
dom. +0.17
bre. +0.15
HIS chainID: C,
resSeq: 98,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 375.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: C, resSeq: 197,
molecule: CYTOCHROME B
3l73-P-501
sad. +0.24
ruf. +0.01
dom. -0.19
bre. +0.17
HIS chainID: P,
resSeq: 84,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 427.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: P, resSeq: 183,
molecule: CYTOCHROME B
3l73-P-502
sad. -0.66
ruf. -0.32
dom. +0.26
bre. +0.10
HIS chainID: P,
resSeq: 98,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 390.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: P, resSeq: 197,
molecule: CYTOCHROME B
3l73-Q-501
sad. +0.04
ruf. -0.22
dom. -0.06
bre. +0.22
HIS chainID: Q,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 457.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: Q, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN