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PyDISH No: 05769

PDB: 3h1h,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.16 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 1.997
molecule: CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL
EC number: 1.10.2.2
Organism: Gallus gallus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.083
molecule: same as ligand #1

List of other hemes in pdb:3h1h

ID of heme Distortion Axial ligands on heme Function & structure
3h1h-C-501
sad. +0.17
ruf. -0.22
dom. -0.09
bre. +0.24
HIS chainID: C,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 422.0 Å3
d(Fe-oop): 0.046 Å
HIS chainID: C, resSeq: 183,
molecule: Cytochrome b
3h1h-C-502
sad. -0.72
ruf. -0.40
dom. +0.05
bre. +0.20
HIS chainID: C,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 374.0 Å3
d(Fe-oop): 0.016 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
3h1h-P-501
sad. +0.37
ruf. -0.21
dom. -0.12
bre. +0.21
HIS chainID: P,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 437.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: P, resSeq: 183,
molecule: Cytochrome b
3h1h-P-502
sad. -0.65
ruf. -0.30
dom. +0.15
bre. +0.13
HIS chainID: P,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 379.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: P, resSeq: 197,
molecule: Cytochrome b
3h1h-Q-501
sad. +0.08
ruf. -0.15
dom. +0.00
bre. +0.25
HIS chainID: Q,
resSeq: 41,
molecule: CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL
oxidoreductase
oligomeric count: 20
pocket vol.: 488.0 Å3
d(Fe-oop): 0.035 Å
MET chainID: Q, resSeq: 160,
molecule: CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL