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PyDISH No: 05757

PDB: 3gw9,
chainID: C, resSeq: 480
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.87 Å

axial ligand #1: CYS

chainID: C,
resSeq: 422,
Coordination distance[Å]: 2.427
molecule: STEROL 14ALPHA-DEMETHYLASE
EC number: 1.14.13.70
Organism: Trypanosoma brucei

axial ligand #2: VNI

chainID: C,
resSeq: 490,
Coordination distance[Å]: 1.994
molecule: N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide

List of other hemes in pdb:3gw9

ID of heme Distortion Axial ligands on heme Function & structure
3gw9-A-480
sad. -0.15
ruf. -0.64
dom. -0.20
bre. +0.08
CYS chainID: A,
resSeq: 422,
molecule: STEROL 14ALPHA-DEMETHYLASE
oxidoreductase
oligomeric count: 1
pocket vol.: 422.0 Å3
d(Fe-oop): 0.073 Å
VNI chainID: A, resSeq: 490,
molecule: N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
3gw9-B-480
sad. -0.10
ruf. -0.71
dom. -0.21
bre. +0.02
CYS chainID: B,
resSeq: 422,
molecule: STEROL 14ALPHA-DEMETHYLASE
oxidoreductase
oligomeric count: 1
pocket vol.: 428.0 Å3
d(Fe-oop): 0.020 Å
VNI chainID: B, resSeq: 490,
molecule: N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
3gw9-D-480
sad. -0.10
ruf. -0.70
dom. -0.15
bre. +0.36
CYS chainID: D,
resSeq: 422,
molecule: STEROL 14ALPHA-DEMETHYLASE
oxidoreductase
oligomeric count: 1
pocket vol.: 441.0 Å3
d(Fe-oop): 0.014 Å
VNI chainID: D, resSeq: 490,
molecule: N-[(1R)-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl]-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide