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PyDISH No: 04673

PDB: 2x5v,
chainID: C, resSeq: 1334
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.0 Å

axial ligand #1: MET

chainID: C,
resSeq: 110,
Coordination distance[Å]: 2.292
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
Organism: BLASTOCHLORIS VIRIDIS

axial ligand #2: HIS

chainID: C,
resSeq: 136,
Coordination distance[Å]: 2.199
molecule: same as ligand #1

List of other hemes in pdb:2x5v

ID of heme Distortion Axial ligands on heme Function & structure
2x5v-C-1333
 sad. +0.69
ruf. -0.17
dom. -0.07
bre. -0.22
 MET chainID: C,
resSeq: 74,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 349.0 Å3
d(Fe-oop): 0.065 Å
HIS chainID: C, resSeq: 91,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
2x5v-C-1335
 sad. +0.73
ruf. -0.19
dom. +0.13
bre. -0.24
 MET chainID: C,
resSeq: 233,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 322.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: C, resSeq: 248,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
2x5v-C-1336
 sad. +0.17
ruf. -0.36
dom. +0.03
bre. -0.33
 HIS chainID: C,
resSeq: 124,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 366.0 Å3
d(Fe-oop): 0.040 Å
HIS chainID: C, resSeq: 309,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT