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PyDISH No: 03977

PDB: 2kmy,
chainID: A, resSeq: 305
heme type: C

distortion

Protein data

function: electron transporter
experiment: SOLUTION NMR

axial ligand #1: HIS

chainID: A,
resSeq: 69,
Coordination distance[Å]: 2.002
molecule: Cytochrome c3
Organism: Desulfovibrio desulfuricans

axial ligand #2: HIS

chainID: A,
resSeq: 106,
Coordination distance[Å]: 1.891
molecule: same as ligand #1

List of other hemes in pdb:2kmy

ID of heme Distortion Axial ligands on heme Function & structure
2kmy-A-233
 sad. +0.10
ruf. -0.32
dom. -0.04
bre. -0.19
 HIS chainID: A,
resSeq: 22,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 497.0 Å3
d(Fe-oop): 0.038 Å
HIS chainID: A, resSeq: 34,
molecule: Cytochrome c3
2kmy-A-251
 sad. +0.06
ruf. -0.32
dom. -0.13
bre. -0.21
 HIS chainID: A,
resSeq: 35,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 522.0 Å3
d(Fe-oop): 0.046 Å
HIS chainID: A, resSeq: 52,
molecule: Cytochrome c3
2kmy-A-282
 sad. +0.32
ruf. -0.04
dom. -0.01
bre. -0.18
 HIS chainID: A,
resSeq: 25,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 520.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: A, resSeq: 83,
molecule: Cytochrome c3