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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 2.73 Å
origomeric count: 6
axial ligand #1: HIS
chainID: B,resSeq: 111,
Coordination distance[Å]: 2.345
molecule: Cytochrome b
Organism: Rhodobacter capsulatus SB 1003
axial ligand #2: HIS
chainID: B,resSeq: 212,
Coordination distance[Å]: 2.317
molecule: same as ligand #1
List of other hemes in pdb:29yd
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
29yd-B-501 |
sad. +0.02 ruf. +0.24 dom. +0.10 bre. -0.12 |
HIS | chainID: B, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 492.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: B, resSeq: 198, molecule: Cytochrome b |
|||
29yd-C-501 |
sad. +0.27 ruf. -0.61 dom. -0.32 bre. -0.14 |
HIS | chainID: C, resSeq: 38, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 474.0 Å3 d(Fe-oop): 0.035 Å |
| MET | chainID: C, resSeq: 183, molecule: Cytochrome c1 |
|||
29yd-E-501 |
sad. +0.03 ruf. +0.24 dom. +0.11 bre. -0.12 |
HIS | chainID: E, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 496.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: E, resSeq: 198, molecule: Cytochrome b |
|||
29yd-E-502 |
sad. -0.46 ruf. -0.50 dom. +0.21 bre. -0.08 |
HIS | chainID: E, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 484.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: E, resSeq: 212, molecule: Cytochrome b |
|||
29yd-F-501 |
sad. +0.27 ruf. -0.61 dom. -0.34 bre. -0.14 |
HIS | chainID: F, resSeq: 38, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 508.0 Å3 d(Fe-oop): 0.045 Å |
| MET | chainID: F, resSeq: 183, molecule: Cytochrome c1 |
|||