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PyDISH No: 02577

PDB: 1up9,
chainID: A, resSeq: 203
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.35 Å

axial ligand #1: HIS

chainID: A,
resSeq: 25,
Coordination distance[Å]: 2.001
molecule: CYTOCHROME C3
Organism: DESULFOVIBRIO DESULFURICANS

axial ligand #2: HIS

chainID: A,
resSeq: 83,
Coordination distance[Å]: 2.009
molecule: same as ligand #1

List of other hemes in pdb:1up9

ID of heme Distortion Axial ligands on heme Function & structure
1up9-A-201
sad. -0.01
ruf. -0.79
dom. -0.22
bre. -0.06
HIS chainID: A,
resSeq: 22,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 393.0 Å3
d(Fe-oop): 0.005 Å
HIS chainID: A, resSeq: 34,
molecule: CYTOCHROME C3
1up9-A-202
sad. +0.06
ruf. -0.49
dom. -0.03
bre. -0.05
HIS chainID: A,
resSeq: 35,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 431.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: A, resSeq: 52,
molecule: CYTOCHROME C3
1up9-A-204
sad. +1.07
ruf. +0.48
dom. +0.08
bre. +0.02
HIS chainID: A,
resSeq: 69,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 397.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: A, resSeq: 106,
molecule: CYTOCHROME C3