Browser

PyDISH No: 00483

PDB: 1dgg,
chainID: D, resSeq: 2003
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: TYR

chainID: D,
resSeq: 358,
Coordination distance[Å]: 1.825
molecule: CATALASE
EC number: 1.11.1.6
Organism: Homo sapiens

axial ligand #2: CYN

chainID: D,
resSeq: 4003,
Coordination distance[Å]: 1.635
molecule: CYANIDE ION

List of other hemes in pdb:1dgg

ID of heme Distortion Axial ligands on heme Function & structure
1dgg-A-2000
sad. -0.16
ruf. +0.61
dom. +0.21
bre. -0.02
TYR chainID: A,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 355.0 Å3
d(Fe-oop): 0.161 Å
CYN chainID: A, resSeq: 4000,
molecule: CYANIDE ION
1dgg-B-2001
sad. -0.02
ruf. +0.79
dom. +0.35
bre. +0.11
TYR chainID: B,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 369.0 Å3
d(Fe-oop): 0.085 Å
CYN chainID: B, resSeq: 4001,
molecule: CYANIDE ION
1dgg-C-2002
sad. +0.14
ruf. +0.68
dom. +0.21
bre. +0.19
TYR chainID: C,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 354.0 Å3
d(Fe-oop): 0.091 Å
CYN chainID: C, resSeq: 4002,
molecule: CYANIDE ION