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PyDISH No: 00481

PDB: 1dgg,
chainID: B, resSeq: 2001
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: TYR

chainID: B,
resSeq: 358,
Coordination distance[Å]: 1.818
molecule: CATALASE
EC number: 1.11.1.6
Organism: Homo sapiens

axial ligand #2: CYN

chainID: B,
resSeq: 4001,
Coordination distance[Å]: 1.593
molecule: CYANIDE ION

List of other hemes in pdb:1dgg

ID of heme Distortion Axial ligands on heme Function & structure
1dgg-A-2000
sad. -0.16
ruf. +0.61
dom. +0.21
bre. -0.02
TYR chainID: A,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 355.0 Å3
d(Fe-oop): 0.161 Å
CYN chainID: A, resSeq: 4000,
molecule: CYANIDE ION
1dgg-C-2002
sad. +0.14
ruf. +0.68
dom. +0.21
bre. +0.19
TYR chainID: C,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 354.0 Å3
d(Fe-oop): 0.091 Å
CYN chainID: C, resSeq: 4002,
molecule: CYANIDE ION
1dgg-D-2003
sad. -0.07
ruf. +0.67
dom. +0.34
bre. +0.18
TYR chainID: D,
resSeq: 358,
molecule: CATALASE
oxidoreductase
oligomeric count: 4
pocket vol.: 368.0 Å3
d(Fe-oop): 0.094 Å
CYN chainID: D, resSeq: 4003,
molecule: CYANIDE ION